BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H09LP1|AL429483
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1605 1301 0.0
>3x_Contig1605
Length = 12373
Score = 1301 bits (624), Expect = 0.0
Identities = 799/895 (89%), Gaps = 6/895 (0%)
Strand = Plus / Plus
Query: 54 atatatgtatgaaggttgtwaatcagagtatagtgaagagcaattttgacackcaaatga 113
||||||||| ||||| || ||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 3160 atatatgtaagaaggcggttaatcagagtatag-gaagagcaattc-gacacgcaaatga 3217
Query: 114 ttacgcangtatatatctcgtagamaawaratacwwaaamaawaaarwwcaacataaact 173
||||||| | |||||||||||||| || | |||| ||| || ||| |||||||||||
Sbjct: 3218 ttacgcatgcatatatctcgtagacaatagatacttaaacaataaagttcaacataaact 3277
Query: 174 gtmtgaatgggtcagaaagagggttaagtctggaacwtaaaamwtcagagawatttgcac 233
|| ||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||
Sbjct: 3278 gtctgaatgggtcagaaagagggttaagtc-ggaacttaaaacttcagagatatttgcac 3336
Query: 234 agactacwgwgttttttgcawctaatcgaagaatgtcamwcattcctaaagtaaacgaag 293
||||| | | |||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 3337 agacttctgtgttttttgcatctaatcgatgaatgtcactcattcctaaagtaaacgaag 3396
Query: 294 atcwatmmaaaraagtawtawwtawaaawwraagawagwwtaaacactagtcaatwttgt 353
|| || ||| ||||| || || || | || || ||||||||||||| | ||||
Sbjct: 3397 ttctatccaaagaagtattatttattaattgatgatagtttaaacactagtcatttttgt 3456
Query: 354 accwgtaaawatactaawgttaccaaawawttttaaaacaatagattgaaagccacccaw 413
||| ||||| ||||||| ||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 3457 acctgtaaatatactaatgttaccaaatatttttaaaacaatag-ttgaaagccacccat 3515
Query: 414 agwcgtwtaagtwatccttttctaggtcaawwacacgacatwwacatamtggacaaatcw 473
|| ||| ||||| ||||||||||||||||| ||||||||| || || ||||||||||
Sbjct: 3516 agtcgtttaagttatccttttctaggtcaattacacgacatttacttactggacaaatct 3575
Query: 474 taacatwggwagaaatcaggggaaagccagwaacacagcaccttwtccactcawgttttg 533
|||||| || ||| |||||||| ||||||| ||||||||||||| |||||||| ||||||
Sbjct: 3576 taacattggtagatatcaggggtaagccagtaacacagcaccttttccactcatgttttg 3635
Query: 534 attctgatacaawgaagwactcattcgcatwcttatwgaaatcaaaatatwccgaaataa 593
|||||||||||| || | ||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 3636 attctgatacaatgatgttctcattcgcattcttattgaaatcaaaatattccgaaataa 3695
Query: 594 actgagcctttaaatwcgactgctgcaagcatcaaatggtgggctttctcctagaagtac 653
|||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3696 actg-gcctttaaattcgactgctgcaagc-tcaaatggtgggctttctcctagaagtac 3753
Query: 654 agataaccaaatagcatacgcttgatctaacgggtttgtgatttcgtttaggtggttgga 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3754 agataaccaaatagcatacgcttgatctaacgggtttgtgatttcgtttaggtggttgga 3813
Query: 714 aacataagaaaagattaatgtatgtatttttttagcagatggaagatcttctatgaagct 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3814 aacataagaaaagattaatgtatgtatttttttagcagatggaagatcttctatgaagct 3873
Query: 774 actgaatctccatwgtagcatctctttactttttargaaaramvamaagyagtcttcgaa 833
||||||||||||| ||||||||||||||||||||| || | | ||| ||||||||||
Sbjct: 3874 actgaatctccattgtagcatctctttactttttaggattgatgataagtagtcttcgaa 3933
Query: 834 tgactgggaagtatcaaagactttttcgcttatcaaattagccatatttgaagctggtgc 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 tgactgggaagtatcaaagactttttcgcttatcaaattagccatatttgaagctggtgc 3993
Query: 894 attgtatacattgtaggtttgataccaagccaaaccagacgctctatctgatacc 948
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3994 attgtatacattgtaggtttgataccaagccaaaccagacgctttatctgatacc 4048
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.721 1.36
Gapped
Lambda K H
1.45 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5030
Number of Sequences: 1807
Number of extensions: 5030
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.5 bits)